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Ans | A | Title
1 |   | Correct for gene length or read counts in GO enrichment analysis
1 | Y | How to run enrichment analysis of protein functional annotation?
2 |   | Is there a way to quickly verify the presence of some SNPs in Fast...
2 | Y | How to extract / convert gff3 CDS sequences to multifasta
1 |   | What is a good pipeline for using public domain exomes as controls?
0 |   | Differences between TM and GDT-TS scores for structure comparison
0 |   | VerifyBamID freemix score
4 | Y | How to calculate p-values for fold changes?
2 | Y | Which measure should be used in a PCA or RNA-seq data? TPM or counts?
1 |   | Where can I find a GWAS data set about genotypes and phenotypes fo...
1 | Y | Mathematical notation for formulating a rank score
1 | Y | Analyzing Illumina Counts
2 | Y | GRCh38 centromeres mappability
0 |   | Sleuth: transcripts with beta close to 0 are considered differenti...
2 | Y | Removing PCR duplicates in RNA-seq Analysis
4 | Y | What is the difference between FASTA, FASTQ, and SAM file formats?
0 |   | How to confirm exon shuffling in a gene?
0 |   | Using signal peptide and the expression levels of signal recogniti...
1 | Y | How to count reads in bam per bed interval with bedtools
1 | Y | Split FASTQ and matching BAM into matching chunks
2 | Y | How to convert fastq to fast5
2 | Y | Why some of the gene peptides returned by biomaRt do not have an a...
2 | Y | Can gene co-expression networks be used to help identify different...
7 | Y | What are the available cloud computing services for bioinformatics?
2 | Y | Difference between CPM and TPM and which one for downstream analysis?
1 | Y | How to filter intervals (reads or genomic coordinates) that have t...
2 | Y | How to detect a mutation and predict its consequence?
3 | Y | How can I do an overlapping sequence count in Biopython?
3 | Y | Tools to create annotated table of variants from VCF
5 | Y | Merging bed records based on name
2 | Y | How to adapt the fgseaL function to perform rapidGSEA computation ...
0 |   | Where can I find summary data for how common certain mutation *typ...
2 | Y | Human body sites knowledge base
2 | Y | Subset FASTA file by species name
1 | Y | Given a Genomic Ranges of SNPs, how to inject these SNPs in genome...
1 | Y | Tool or script to parse annotated VCF files
4 | Y | Why sequence the human genome at 30x coverage?
1 |   | Melt p-values for CpG sites mapping to the same gene
1 |   | Secretome and membrane receptor profiles
4 | Y | How to convert BED to GFF3
1 | Y | How to calculate overall reference coverage with MUMmer?
1 | Y | Software recommendations - DNA composition
1 | Y | IGV faster loading remote bigWig files
2 | Y | Major variability in speed of BLAST between proteins
1 |   | Can a customized GRCh38 .gtf file be used with any of the GRCh38 r...
1 |   | Protein Pockets Match (Binding site prediction)
3 | Y | How do you write a .gz fastq file with Biopython?
1 | Y | Cannot install chromosomer
3 | Y | BAM to BigWig without intermediary BedGraph
1 |   | How can I combine a kinship matrix with subset individuals when us...
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